und Carbapenemase bildende Enterobacteriaceae

Institut für Lebensmittelsicherheit und -hygiene
Pflanzliche Lebensmittel als Vektoren für
ESBL- und Carbapenemase bildende
Enterobacteriaceae
Katrin Zurfluh
Institut für Lebensmittelsicherheit und -hygiene
Vetsuisse-Fakultät
Universität Zürich, Schweiz
www.ils.uzh.ch
Institut für Lebensmittelsicherheit und -hygiene
Institut für Lebensmittelsicherheit und -hygiene
Pigeons: 0.3%
Cormorants: 6.6%
Freshwater fish:
18%
Cattle: 13.7%
Bodies of water:
36%
Pig: 15.3 %
Healthy
human: 5.8%
Broiler (herd-level):
63.4%
Institut für Lebensmittelsicherheit und -hygiene
Institut für Lebensmittelsicherheit und -hygiene
Importgemüse (Dominican Republic, India, Thailand and Vietnam)
169 Proben (25.4% positiv)
Zurfluh et al. 2015
Institut für Lebensmittelsicherheit und -hygiene
Importgemüse (Dominican Republic, India, Thailand and Vietnam)
Dominican
Republic
India
Thailand
Vietnam
ESBL DR06
ESBL DR24
ESBL DR45
ESBL DR13
ESBL DR26
ESBL DR47T
ESBL DR47B
ESBL DR23
ESBL DR27
ESBL DR31
ESBL DR09
ESBL DR28
52SK1
ESBL H238 V
ESBL H238 T
E37SK2
E37SK2.1
19SK1
46SK1
46SK2
E48t
C48SK3gb
E3SK2
E49SK1b
E49SK2b
E49t
C49b
28SK1
37SK1
54SK1
54SK2
49SK1
49SK2
45SK1
ESBL H226 T
ESBL H226 B
ESBL H226 L
23SK1
23SK2
ESBL H241 B
ESBL H241 T
ESBL H239 V
ESBL H239T
33SK1
33SK2
25SK1
18SK1
E5
21SK1
ESBL H242
ESBL H227
2SK1
6SK1
E26SK1
13SK1
40SK1
40SK2
15SK1
E25
41SK1
Bitter
Bitter
Chilli
Curry
Curry
cucumber
cucumber
leaves
leaves
Curry leaves
Egg plant
Egg plant
Egg plant
Green Chilli
Small Chilli
Cucumber
Curry leaves
Curry leaves
Curry leaves
Curry Leaves
Green Chilli
Okra (marrow)
Okra
Okra
Okra
Okra
Parwal beans
Peppermint
Cha-om (acacia)
Coriander
Curry leaves
Garlic chives
Green Chilli
Lemongrass
Sweet basil
Yard long beans
Yard long beans
Water mimosa
Water spinach
Basil leaves
Ceylon spinach
Curry leaves
Egg plant
Holy Basil
Lemongrass
Soy sprouts
Yard long beans
ST131
ST661
ST405/CC405
ST307
ST38/CC38
ST1742
ST1656
ST45
ST147
ST307
ST167 /CC10
ST410/CC 23
ST1739
ST155/CC155
ST4681
ST1741
ST152
ST1881
ST1740
ST37
ST38/CC38
ST155/CC155
ST443/CC205
ST997
D
B1
A
A
C3 0
Te1 0
TMP5
SM Z
S1 0
K3 0
GM 1 0
CI P 5
N A3 0
CT X 3 0
CF 3 0
A M C3 0
AM 1 0
SH V-1 2
SH V-2 a
SH V-2
CT X - M - 6 3
CT X - M - 6 5
CT X - M - 2 7
CT X - M - 1 4
CT X - M - 5 5
169 Gemüse Proben
50 Dominikanische Republik
39 Indien
60 Thailand
20 Vietnam
B1
B1
B1
D
B1
B1
ST4682
B1
B1
ST36
ST58/CC155
ST45
ST208
Antibiotic re sist ance profile
B2
D
ST4684
ST244
ST641/CC86
ST15
nd
ST167/CC10
ST393/CC 31
ST58/CC155
ST48/CC10
ST4680
ST17
ST4679
ST1743
ST226/CC226
ST458
ST1530
ST76
ST3696
ST37
ST16
ST4683
ST37
ST10/CC10
CT X - M - 1 5
C. s a k a z a k ii
E. a e r o g e n e s
E . c lo a c a e
ESBL( s)
E.coli
Ph ylogroup
CT X - M - 3
MLST/ CC
Species
CT X - M - 1
V ege ta ble
K . p n e u m o n ia e
Sam ple I D
E. co li
Origin
A
A
D
B1
A
B1
B1
A
A
B1
A
B1
43 (25.4%) ESBL-positive Proben
11 (22%) Dominikanische Republik
13 (33%) Indien
11 (18%) Thailand
8 (40%) Vietnam
• 60 individuelle ESBL-produzierende
Isolate
• 47 multiresistent Isolate (> 3
Antibiotika-Klassen)
Zurfluh et al. 2015
Institut für Lebensmittelsicherheit und -hygiene
Importgemüse (Dominican Republic, India, Thailand and Vietnam)
Dominican
Republic
India
Thailand
Vietnam
ESBL DR06
ESBL DR24
ESBL DR45
ESBL DR13
ESBL DR26
ESBL DR47T
ESBL DR47B
ESBL DR23
ESBL DR27
ESBL DR31
ESBL DR09
ESBL DR28
52SK1
ESBL H238 V
ESBL H238 T
E37SK2
E37SK2.1
19SK1
46SK1
46SK2
E48t
C48SK3gb
E3SK2
E49SK1b
E49SK2b
E49t
C49b
28SK1
37SK1
54SK1
54SK2
49SK1
49SK2
45SK1
ESBL H226 T
ESBL H226 B
ESBL H226 L
23SK1
23SK2
ESBL H241 B
ESBL H241 T
ESBL H239 V
ESBL H239T
33SK1
33SK2
25SK1
18SK1
E5
21SK1
ESBL H242
ESBL H227
2SK1
6SK1
E26SK1
13SK1
40SK1
40SK2
15SK1
E25
41SK1
Bitter
Bitter
Chilli
Curry
Curry
cucumber
cucumber
leaves
leaves
Curry leaves
Egg plant
Egg plant
Egg plant
Green Chilli
Small Chilli
Cucumber
Curry leaves
Curry leaves
Curry leaves
Curry Leaves
Green Chilli
Okra (marrow)
Okra
Okra
Okra
Okra
Parwal beans
Peppermint
Cha-om (acacia)
Coriander
Curry leaves
Garlic chives
Green Chilli
Lemongrass
Sweet basil
Yard long beans
Yard long beans
Water mimosa
Water spinach
Basil leaves
Ceylon spinach
Curry leaves
Egg plant
Holy Basil
Lemongrass
Soy sprouts
Yard long beans
ST131
ST661
ST405/CC405
ST307
ST38/CC38
ST1742
ST1656
ST45
ST147
ST307
ST167 /CC10
ST410/CC 23
ST1739
ST155/CC155
ST4681
ST1741
ST152
ST1881
ST1740
ST37
ST38/CC38
ST155/CC155
ST443/CC205
ST997
B2
D
D
B1
A
A
B1
B1
D
B1
B1
ST4682
B1
B1
ST36
ST58/CC155
ST45
ST208
C3 0
Te1 0
TMP5
SM Z
S1 0
K3 0
GM 1 0
CI P 5
N A3 0
CT X 3 0
CF 3 0
A M C3 0
AM 1 0
SH V-1 2
SH V-2 a
SH V-2
CT X - M - 6 3
CT X - M - 6 5
CT X - M - 2 7
CT X - M - 1 4
CT X - M - 5 5
Antibiotic re sist ance profile
Gesamtzahl der Isolate:
Escherichia coli
Klebsiella pneumoniae
Enterobacter cloacae
60
26
26
6
Enterobacter aerogenes
Cronobacter sakazakii
1
1
B1
ST4684
ST244
ST641/CC86
ST15
nd
ST167/CC10
ST393/CC 31
ST58/CC155
ST48/CC10
ST4680
ST17
ST4679
ST1743
ST226/CC226
ST458
ST1530
ST76
ST3696
ST37
ST16
ST4683
ST37
ST10/CC10
CT X - M - 1 5
C. s a k a z a k ii
E. a e r o g e n e s
E . c lo a c a e
ESBL( s)
E.coli
Ph ylogroup
CT X - M - 3
MLST/ CC
Species
CT X - M - 1
V ege ta ble
K . p n e u m o n ia e
Sam ple I D
E. co li
Origin
A
A
D
B1
A
B1
Vorherrschende ESBL-Typen:
CTX-M-15
CTX-M-14
CTX-M-55 (v.a. Thailand)
B1
A
A
B1
A
B1
• Plasmid-assoziiert
• Menschen-assoziiert
• Kontaminiertes Wasser
Good agcriculture practice
Institut für Lebensmittelsicherheit und -hygiene
Plasmids-Typen – Konjugations-Experimente
Donor strain:
ESBL-producing Isolates
Strain I D
ESBL DR06
ESBL DR28
ESBL DR09
ESBL DR47T
E37SK2
46SK1
C49b
33SK1
ESBL H226L
ESBL H241B
23SK2
ESBL H227
25SK1
33SK2
ESBL H239T
ESBL H226T
E26SK1
E25
13SK1
Replicon type(s)1
F
F, FIB
FIA
N
I1
R
HI1B
F
F, R
X2
HI2
N
R
Acceptor strain:
E. coli HK225 (StrepR, RifR)
ESBL
CTX-M-15
CTX-M-65
CTX-M-15
CTX-M-15
CTX-M-1
CTX-M-15
CTX-M-15
CTX-M-14
CTX-M-55
CTX-M-55
CTX-M-55
CTX-M-15
CTX-M-14
CTX-M-27
CTX-M-63
SHV-12
CTX-M-55
CTX-M-14
CTX-M-15
Species
E. coli
E. coli
K. pneumoniae
K. pneumoniae
E. coli
K. pneumoniae
E. aerogenes
E. coli
E. coli
E. coli
E. coli
K. pneumoniae
K. pneumoniae
K. pneumoniae
K. pneumoniae
K. pneumoniae
E. coli
K. pneumoniae
E. cloacae
Country of origin
Dominican Republic
Dominican Republic
Dominican Republic
Dominican Republic
India
India
India
Thailand
Thailand
Thailand
Thailand
Thailand
Thailand
Thailand
Thailand
Thailand
Vietnam
Vietnam
Vietnam
-: not assignable to any of the
tested replicon types
Institut für Lebensmittelsicherheit und -hygiene
Importgemüse (Dominican Republic, India, Thailand and Vietnam)
Dominican
Republic
EAEC
India
Thailand
Vietnam
ESBL DR06
ESBL DR24
ESBL DR45
ESBL DR13
ESBL DR26
ESBL DR47T
ESBL DR47B
ESBL DR23
ESBL DR27
ESBL DR31
ESBL DR09
ESBL DR28
52SK1
ESBL H238 V
ESBL H238 T
E37SK2
E37SK2.1
19SK1
46SK1
46SK2
E48t
C48SK3gb
E3SK2
E49SK1b
E49SK2b
E49t
C49b
28SK1
37SK1
54SK1
54SK2
49SK1
49SK2
45SK1
ESBL H226 T
ESBL H226 B
ESBL H226 L
23SK1
23SK2
ESBL H241 B
ESBL H241 T
ESBL H239 V
ESBL H239T
33SK1
33SK2
25SK1
18SK1
E5
21SK1
ESBL H242
ESBL H227
2SK1
6SK1
E26SK1
13SK1
40SK1
40SK2
15SK1
E25
41SK1
Bitter
Bitter
Chilli
Curry
Curry
cucumber
cucumber
leaves
leaves
Curry leaves
Egg plant
Egg plant
Egg plant
Green Chilli
Small Chilli
Cucumber
Curry leaves
Curry leaves
Curry leaves
Curry Leaves
Green Chilli
Okra (marrow)
Okra
Okra
Okra
Okra
Parwal beans
Peppermint
Cha-om (acacia)
Coriander
Curry leaves
Garlic chives
Green Chilli
Lemongrass
Sweet basil
Yard long beans
Yard long beans
Water mimosa
Water spinach
Basil leaves
Ceylon spinach
Curry leaves
Egg plant
Holy Basil
Lemongrass
Soy sprouts
Yard long beans
ST131
ST661
ST405/CC405
ST307
ST38/CC38
ST1742
ST1656
ST45
ST147
ST307
ST167 /CC10
ST410/CC 23
ST1739
ST155/CC155
ST4681
ST1741
ST152
ST1881
ST1740
ST37
ST38/CC38
ST155/CC155
ST443/CC205
ST997
B2
C3 0
Te1 0
TMP5
SM Z
S1 0
K3 0
GM 1 0
CI P 5
N A3 0
CT X 3 0
CF 3 0
A M C3 0
AM 1 0
SH V-1 2
SH V-2 a
SH V-2
CT X - M - 6 3
CT X - M - 6 5
CT X - M - 2 7
CT X - M - 1 4
CT X - M - 5 5
Escherichia coli
Klebsiella pneumoniae
D
B1
A
A
B1
B1
B1
D
B1
B1
ST4682
B1
B1
ST36
ST58/CC155
ST45
ST208
Ant ibiot ic resist an ce profile
D
ST4684
ST244
ST641/CC86
ST15
nd
ST167/CC10
ST393/CC 31
ST58/CC155
ST48/CC10
ST4680
ST17
ST4679
ST1743
ST226/CC226
ST458
ST1530
ST76
ST3696
ST37
ST16
ST4683
ST37
ST10/CC10
CT X - M - 1 5
C. s a k a z a k ii
E. a e r o g e n e s
E . c lo a c a e
ESBL( s)
E.coli
Phylogroup
CT X - M - 3
MLST/ CC
Species
CT X - M - 1
Ve ge ta ble
K . p n e u m o n ia e
Sam ple I D
E. co li
Origin
A
Epidemic colones:
E. coli B2:ST131
E. coli D:ST405
E. coli D:ST38
K. pneumoniae ST15
K. pneumoniae ST147
A
D
B1
A
B1
B1
A
A
EAEC
E. coli D:ST38
B1
A
B1
Zurfluh et al. 2015
Institut für Lebensmittelsicherheit und -hygiene
Situation Produktion in der Schweiz (RTE Salate)
238 Proben (5 % positiv)
S. fonticola
K. ascorbata
blaESBL
chromosomal codiert
Normalflora Pflanze
Nüesch et al. 2015
Institut für Lebensmittelsicherheit und -hygiene
Importgemüse (Thailand and Vietnam)
Zurfluh, Poirel, Nordmann, Stephan, 2015
Institut für Lebensmittelsicherheit und -hygiene
Fakten zu pKS22::blaOXA-181
blaOXA-181
51, 000kb
IncX3-type
pKS22::blaOXA-181, IncX3
pKP3-A, ColE2, KP, JN205800
Adapted from Liu et al. 2015
Zurfluh, Poirel, Nordmann, Stephan, 2015
Institut für Lebensmittelsicherheit und -hygiene
Take home messages
− Nicht nur als Vektor für „foodborne pathogens“, sondern auch
zunehmend
als
Vektor
für
antibiotikaresistente
Bakterien
(internationaler Handel, good agriculture practice!)
− Import: mehrheitlich E. coli und Klebsiella pneumoniae
CH: Serratia fonticola und Kluyvera ascorbata
− ESBL und Carbapenemase Gene sind oft auf Plasmiden, oder
anderen mobilen Element lokalisiert
− Nicht nur kommensalen sondern auch multiresistente Pathogene
(Bsp EAEC)
Institut für Lebensmittelsicherheit und -hygiene
Herzlichen Dank für Ihre
Aufmerksamkeit!