BRICS Opening Symposium

BRICS Opening Symposium
15th June 2016
Poster Presentations
No
Title
Authors
Systems Biology Methods
1 Genome Analytics – more than Next Generation
Sequencing services
Michael Jarek, Robert Geffers
2 Single molecule real time sequencing - an enabling
technology provided by the DSMZ
Boyke Bunk, Jörg Overmann
3 Microbial and Cellular Proteomics
Susanne Engelmann, Lothar Jänsch
4 The Power of Metabolome Analysis
Meina Neumann-Schaal, Nelli Bill, Lorenz Reimer,
Jacqueline Wolf, Dietmar Schomburg
5 Metabolic Models: To Understand and Redesign Cellular
Wiring and Trade Flows
Marcus Ulbrich, Henning Dannheim, Birte Fredrich, AnjaKristina Schulz, Helge Stark, Dietmar Schomburg
6 Delaunay-Object-Dynamics
Michael Meyer-Hermann
7 Alignment of time-resolved data from high-throughput
experiments
Nada Abidi, Raimo Franke, Peter Findeisen, Frank
Klawonn
8 Sensitivity and hierarchical model families in life sciences Dirk Langemann, Cordula Reisch, Janina Dierkes
9 Sweep Dynamics (SD) plots: Computational identification
of selective sweeps to monitor the adaptation of influenza
viruses
10 Improving metagenome assembly to characterize genetic
variation in the human microbiome
Susanne Reimering, Thorsten Klingen, Kyra Mooren, Alice
McHardy
11 Phylogenies from single cell sequencing data
David Laehnemann, Ute Fischer, Arndt Borkhardt, Alice
McHardy
12 Determination of intrinsic enzyme reaction kinetics using
thermodynamic activities
Jan-Hendrik Grosch, Antje C. Spieß
Adrian Fritz, Andreas Bremges, Peter Hofmann, Alexander
Sczyrba, Alice McHardy
13 DNA-Based Nanorulers for Super-Resolution Microscopy Carsten Forthmann, Max B. Scheible, Jürgen J. Schmied
14 Single-Molecule Sequencing with DNA Origami
Nanoantennas
Katharina Kraatz, Birka Lalkens, Carolin Vietz, Enrico Pibiri,
Guillermo Acuna, Philip Tinnefeld
15 Super Resolution Microscopy: Sharp Images for Biological Mario Raab, Jürgen Schmied, Susanne Holzmeister, Ija
and Biophysical Applications
Jusuk, Birka Lalkens, Philip Tinnefeld
BRICS Opening Symposium
15th June 2016
Poster Presentations
No
Title
Authors
Projects at BRICS
16 From Braunschweig to the world - BRENDA - high level enzyme Sandra Placzek, Lisa Jeske, Antje Chang, Ida Schomburg,
information essential for more than 100000 users per month
Dietmar Schomburg
17 Metabolic model of Sulfolobus acidocaldarius for lignocellulosic
biofuel production
18 Antibody Responses
Julia Helmecke, Dietmar Schomburg
19 Spatial aspects of translation
20 T cell selection, activation, differentiation, and homeostasis
21 Viral infections
Haralampos Hatzikirou
Sahamoddin Khailaie, Philippe Robert
Alessandro Boianelli, Van Kinh Nguyen, Gang Zhao, Esteban A.
Herandenz- Vargas
Antje C. Spieß, Rainer Krull
Antonia Lakowitz, Rainer Krull, Rebekka Biedendieck
22 Institute of Biochemical Engineering
23 Recombinant production of the antibody fragment D1.3 scFv in
Bacillus sp.
24 Tailored production of anti-infectives by Actinomyces sp.
Sebastian Binder, Stefan Dübel, Andrea Marschall, Michael
Meyer-Hermann, Ananya Rastogi, Philippe Robert, Anastasios
Siokis, Alexey Uvarowskii
Sebastian Tesche, Rainer Krull
Clostridium difficile (CDiff)
25 Epidemiology and systems biology of the bacterial pathogen
Clostridium difficile
26 Transcriptional regulatory network – from genetics to systems
biology models
27 Activation of human mucosal associated invariant T lymphocytes
in C. difficile infections
28 Diversity and evolution of the C. difficile mobilome
Mareike Berges, Dieter Jahn
Mareike Berges, Annika Michel, Sarah Wienecke, Dieter Jahn
Björn Bulitta, Lothar Jänsch
Thomas Riedel, Johannes Wittmann, Boyke Bunk, Cathrin Spröer,
Andrea Thürmer, Katrin Gunka, Ortrud Zimmermann, Johannes
Sikorski, Sabine Gronow, Ulrich Nübel, Heiko Liesegang, Uwe
Groß, Rolf Daniel, Jörg Overmann
ElektroBak
29 ElektroBak – Innovative materials & concepts for microbial
Rebekka Biedendieck, Rainer Krull, Uwe Schröder
electrochemical systems
30 ElektroBak – Characterisation of electrochemically active biofilms Christina Engel, Christopher Moß, Simone Thiel, Rebekka
Biedendieck, Rainer Krull, Uwe Schröder
31 Cultivating electrochemically active biofilms under constant flow Alexander Fröhlich, Katrin Dohnt, Christina Engel, Rainer Krull
conditions in an optically accessible flow cell
SFB-TRR 51 Roseobacter
32 Ecology, Physiology and Molecular Biology of the Roseobacter
clade: Towards a Systems Biology Understanding of a Globally
Important Clade of Marine Bacteria
Elisabeth Härtig, Dieter Jahn
33 Comparative genomics of marine Phaeobacter strains reveals a
conserved population structure and high variability of acquired
genes
Heike Freese, Johannes Sikorski, Boyke Bunk, Jörg Overmann
34 Common regulatory networks for the adaptation to low iron and
oxygen tension
35 Adaptation of Dinoroseobacter shibae to oxidative stress
Elisabeth Härtig, Maren Behringer, Matthias Ebert, Steffi Heyber,
Jenny Jacobs, Dieter Jahn
Nicole Beier, Martin Kucklick, Stephan Fuchs, Susanne
Engelmann