PIPs Corvallis2014.pptx

Aust et al. (2013) GCB Bioenergy, online
INVESTOR COUNTRIES
TARGET COUNTRIES
Süddeutsche Zeitung 25./26.06-11
Jörg-Peter Schnitzler
Forstliche Versuchsund Forschungsanstalt
Baden-Württemberg
Research Unit
Environemntal
Simulation
Frank Brodbeck
Udo Sauter
Klaus ButterbachBahl / Hans Papen
Inst. for Meteorology and
Climate Research (IMKIFU) GarmischPartenkirchen
Gero Becker
Klaus Palme
Heinz Rennenberg
Albert-Ludwigs-Universität Freiburg, Institutes of Forstbotanik &
Baumphysiologie; Botanik II; Forstbenutzung und Forstliche
Arbeitswissenschaft
From Maurel et al. (2008)
PIPs support lateral
root development
Peret et al (2012) Nat. Cell Biol.
From Maurel et al. (2008)
PIPs
XIPs
TIPs
NIPs
SIPs
From Gupta & Sankararamakrishnan, 2009, BMC Plant Biol
0.
05
rt
pa
2-4
pip
Pc
an
p
ip
2P
c
3
an
cd
pip
s
2
Pca
-2
n
cd
p
i
p2Pca
s
1cd
npip
s
2
7
par
tialc
ds
partialc
ds
ial
Pcanpip
2-6
ds
ip2-5c
Pcanp
alcds
ti
1-3par
s
PIPs
ip
Pcanp
cds
rtial
cd
ial
cd
s
Pc
a
1-5p
s
cd
Pc
npip
Pca
rt
pa
1-4
pip
an
Pc
2
1pip
an
Pc
ds
an
pip
1-1
c
an
pip
210
Pc
pa
anp
rtia
ip2
-9p
lcd
art
ialc s
ds
Type II
Type I
1.20
relative expression
[log2(pip/act2)]
1.00
0.80
0.60
young leaf
mature leaf
0.40
0.20
0.00
old leaf
2.00
1.80
relative expression
[log2(pip/act2)]
1.60
1.40
1.20
1.00
0.80
0.60
0.40
0.20
0.00
root
phloem
xylem
PcanPIP type 1-RNAi construct
Pcanpip1-2cds
PIP1RNAisingle
Pcanpip1-1cds
Pcanpip1-3cds
Pcanpip1-4cds
Pcanpip1-5cds
GCTCGGAGTCTGGGGGCTGCAATCATCTTCAACAAGGACAGCGCCTGGGATGATCACTGG
GCTCGGAGTCTGGGGGCTGCAATCATCTTCAACAAGGACAGCGCCTGGGATGATCACTGG
GCTCGTAGTCTTGGTGCAGCCATCATCTTCAACAAGGACAAGGCCTGGGATGATCACTGG
GCAAGGAGTCTTGGAGCCGCCATCATCTTCAACAAAGACCATGCATGGGATGACCACTGG
GCCAGAAGTCTTGGTGCAGCCCTCATCTACAACAAGGACGAAGCTTGGGATGATCATTGG
GCCAGAAGTCTTGGTGCAGCCCTCATCTACAACAAAGACCAAGCTTGGGATGACCACTGG
** * ***** ** ** ** ****** ****** ***
** ******** ** ***
PcanPIP type 2-RNAi construct
Pcanpip2-1cds
Pcanpip2-2cds
Pcanpip2-5cds
Pcanpip2-6cds
Pcanpip2-7cds
PIP2RNAisingle
Pcanpip2-3cds
Pcanpip2-4cds
Pcanpip2-8cds
Pcanpip2-9cds
Pcanpip2-10cds
ATCCCTATTACTGGTACTGGCATCAACCCTGCTAGGAGCTTTGGTGCTGCTGTCATCATC
ATCCCTATAACTGGAACTGGCATCAACCCTGCCAGGAGCTTTGGCGCTGCTGTCATCTTC
ATCCCAATCACCGGAACTGGTATCAACCCGGCTAGGAGCTTTGGAGCTGCTGTGATATAC
ATCCCAATCACCGGAACTGGTATCAACCCGGCTAGGAGCTTTGGAGCTGCTGTGATATAC
ATTCCAATCACCGGTACTGGTATCAACCCTGCTAGGAGCTTCGGAGCTGCTGTGATCTAC
ATCCCCATCACTGGAACTGGCATCAACCCTGCTAGGAGCTTTGGAGCTGCTGTGATCTAC
ATCCCCATCACTGGAACTGGCATCAACCCTGCTAGGAGTCTGGGAGCCGCTGTTATCTAC
ATCCCAATCACAGGAACTGGCATCAACCCTGCTAGGAGTCTTGGAGCTGCTGTTATCTAC
ATCCCAATTACTGGCACTGGCATCAACCCTGCTAGGAGCTTCGGAGCTGCTGTCATCTTT
ATTCCCATCACTGCCACGGGCATCAATCCTGCTAGGAGTCTTGGTGCTGCTGTGGTTAAG
ATTCCCATCACCGGAACTGGCATCAATCCTGCTAGAAGCCTTGCTACTAATTTGATTTAT
** ** ** ** * ** ** ***** ** ** ** ** * *
*
* * *
High gene homology
makes it difficult to develop
gene-specific constructs
several members as
RNAi target
– Aquaporins –
a way to improve water use efficiency in poplar?
Screening of lines
PIPs I
PIPs II
*
* *
*
*
*
* *
*
* * *
Significant difference between the lines are indicated by * (Student’s t-tests, n=6±SE, P<0,05)
Vcmax, maximum carboxylation
rate allowed by RubisCO
J, electron transport rate
TPU, triose phosphate use
Rd, day respiration
gm, mesophyll conductance for
CO2
“Fitting photosynthetic CO2 response curves for C3 leaves“
(Sharkey et al., 2007, PC&E)
*
*
*
*
*
*
*
*
*
Significant difference between the transgenic line and WT is indicated by * (student t-test, n=3-6±SE, P<0,05)
Vcmax: maximum carboxylation rate allowed by RubisCO
J:
electron transport rate (based on NADPH requirement)
TPU: triose phosphate use
Rd:
day respiration
gm:
mesophyll conductance of CO2
“Fitting photosynthetic CO2 response curves for C3 leaves“
(Sharkey et al., 2007, PC&E)
*
*
*
Significant difference between the transgenic line and WT is indicated by * (student t-test, n=3-6±SE, P<0,05)
Vcmax: maximum carboxylation rate allowed by RubisCO
J:
electron transport rate (based on NADPH requirement)
TPU: triose phosphate use
Rd:
day respiration
gm:
mesophyll conductance of CO2
HPTS
HPTS acetate
(8-hydroxypyrene-1,3,6-trisulphonic acid)
(acetoxypyrene-1,3,6-trisulphonic acid trisodium salt)
tracer for apoplastic pathway
tracer for symplastic pathway
WT
HPTS
(apoplastic
pathway)
2 hrs uptake of HPTS/
HPTS-A under ambient
conditions;
WT
HPTS-acetate
(symplastic
pathway)
abaxial
adaxial
abaxial
adaxial
fluorescence intensity per
fluorescence dye ( g )
fluorescence intensity (mean grey
value)
fluorescence dye per leaf area
[mg ml-1 ]
WT
25 images/leaf areas analyzed for stomal density
50 stomata analyzed for stomata length
stomata length [ m]
Stomatal density [no. m-2]
*
The PcanPIP-RNAi caused reduction of PIP content of 50%
Effects on H2O
Knock down of PIPs in poplar resulted in higher transpiration
rates
Weak positive effect on WUE at high rel. Humidity
Effects on CO2
Knock down of PIPs resulted in higher net CO2 assimilation
rates, higher RubisCO carboxylation rate, and higher Electron
transport rates
Effects are light dependent