MEGPIRRUNGCurriculumVitae 10943 E 28TH PLACE, DENVER CO, 80238 - 2165268802 - [email protected] CURRENT POSITION PhD candidate Goerg Lab University of Colorado Anschutz Medical Campus [2013:] EDUCATION [2010:] AWARDS & GRANTS Computational Biology Graduate Program University of Colorado Anschutz Medical Campus Biochemistry Graduate Program University of Colorado Boulder [2008:2010] Bachelor of Science in Computer Science Bowling Green State University, College of Arts and Sciences [2004:2008] NLM Training Grant NLM Training Grant NLM Training Grant NLM Training Grant Sol Siegal Scholarship Program NASA SEMAA Next Generation Pioneer Sol Siegal Scholarship Program Sol Siegal Scholarship Program [SPOKEN|SCRIPTING|PROGRAMMING] LANGUAGES English ***** Japanese ***** Spanish ***** Python ***** Javascript ***** HTML ***** Java ***** c++ ***** SUBJECT AREAS OF EXPERTISE 100 0 wa ft So i Des / ev D eb W gn gn ev D re ic ph a Gr i Des GN Viz ESI ta D a D UX UI/ Jul 2013 Jul 2012 Aug 2010 Aug 2009 Aug 2007 Sep 2006 Aug 2006 Aug 2005 SKILLS & TOOLS Adobe Suite d3.js JQuery/UI CSS Bioinformatics Shell Wordpress CMS MEGPIRRUNGCurriculumVitae PREVIOUS POSITIONS PORTFOLIO .com Teaching Assistant 2012 Marine Biological Laboratory STAMPS program Robotics Teacher 2010 University of Colorado Upward Bound Program Graduate Mentor 2010 University of Colorado SMART Program Undergraduate Research Assistant 2006:2008 Bowling Green State University Computer Consultant 2005 Residential Computing Connection, Bowling Green State University Web Design Intern 2005 Thumbprint Ltd., formerly ECRM-Online, Solon Ohio Graphic Design Intern 2003 NASA Glenn Research Center, Cleveland Ohio PUBLICATIONS Bacteria from Diverse Habitats Colonize and Compete in the Mouse Gut; Seedorf et al. (Cell 2014) EMPeror: a tool for visualizing high-throughput microbial community data; Vázquez-Baeza Y, Pirrung M, Gonzalez A, Knight R.(Gigascience 2013) Replenishing our defensive microbes; Ursell LK, Van Treuren W, Metcalf JL, Pirrung M, Gewirtz A, Knight R. (Bioessays 2013) Evidence for a persistent microbial seed bank throughout the global ocean; Gibbons SM, Caporaso JG, Pirrung M, Field D, Knight R, Gilbert JA. (Proc Natl Acad Sci 2013) TopiaryExplorer: An application for connecting large phylogenetic trees to environmental metadata; Meg Pirrung, Ryan Kennedy, J. Gregory Caporaso, Jesse Stombaugh, Doug Wendel, and Rob Knight (Bioinformatics 2011) QIIME allows analysis of high-throughput community sequencing data.; Caporaso et al. (Nat Methods 2010) PRESENTATIONS ieeevis doctoral colloquium 2014 talk and poster presentation: “Visualizing Microbiome Data for Scientific Analysis & Communication” ROCKY 2013 talk and poster presentation: “Experimental Determination of Useful and Informative Visualizations of Microbial Ecology Data for Public and Scientific Audiences” BioVis 2013 Poster Presentation; "Experimental Determination of Useful and Informative Visualizations of Microbial Ecology Data for Public and Scientific Audiences" Open Hardware Summit 2012 Talk; "Envobe" VIZBI 2011 Poster Presentation; "TopiaryExplorer" ROCKY 2010 Poster presentation; "TopiaryExplorer" ROCKY 2009 Poster presentation; "QIIME (Quantitative Insights Into Microbial Ecology) Dynamic Rarefaction Graph" RNA 2007 Poster presentation; "Automated RNA multiple sequence alignment using hybrid Stochastic Context-Free Grammars/ Markov Random Fields to model base clusters and motif swaps" BGSU Research Conference 2007 Poster presentation; "Automated RNA multiple sequence alignment using hybrid Stochastic Context-Free Grammars/Markov Random Fields to model base clusters and motif swaps" NASA SEMAA Next Generation Pioneer Speech, 2006 Robotics programming demonstration for Dr. Adena Williams Loston, Associate Administrator for Education at NASA, 2003, NASA Glenn Research Aerospace Education Laboratory CODE SAMPLES https://github.com/meganap
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